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Cluster: HRGMv2_0889_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0889_17 HRGMv2_0889_17_105 112166 113899 - GH13_30
STP HRGMv2_0889_17 HRGMv2_0889_17_106 114485 115231 - STAS
STP HRGMv2_0889_17 HRGMv2_0889_17_107 115310 117655 - GAF | SpoIIE
TC HRGMv2_0889_17 HRGMv2_0889_17_108 118405 119433 - 3.A.1.5.36
TC HRGMv2_0889_17 HRGMv2_0889_17_109 119433 120524 - 3.A.1.5.34
TC HRGMv2_0889_17 HRGMv2_0889_17_110 120527 121462 - 3.A.1.5.11
TC HRGMv2_0889_17 HRGMv2_0889_17_111 121477 122514 - 3.A.1.5.37
TC HRGMv2_0889_17 HRGMv2_0889_17_112 122671 124347 - 3.A.1.5.35
Gene ID: HRGMv2_0889_17_105
Type: CAZyme
Location: 112166 - 113899 (-)
Gene ID: HRGMv2_0889_17_106
Type: STP
Location: 114485 - 115231 (-)
Gene ID: HRGMv2_0889_17_107
Type: STP
Location: 115310 - 117655 (-)
Gene ID: HRGMv2_0889_17_108
Type: TC
Location: 118405 - 119433 (-)
Gene ID: HRGMv2_0889_17_109
Type: TC
Location: 119433 - 120524 (-)
Gene ID: HRGMv2_0889_17_110
Type: TC
Location: 120527 - 121462 (-)
Gene ID: HRGMv2_0889_17_111
Type: TC
Location: 121477 - 122514 (-)
Gene ID: HRGMv2_0889_17_112
Type: TC
Location: 122671 - 124347 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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