Cluster: HRGMv2_0889_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0889
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0889_1 | HRGMv2_0889_1_12 | 12380 | 13663 | - | GT4 |
| CAZyme | HRGMv2_0889_1 | HRGMv2_0889_1_13 | 13663 | 14766 | - | GT4 |
| TC | HRGMv2_0889_1 | HRGMv2_0889_1_14 | 14768 | 15547 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_0889_1_12
Type: CAZyme
Location: 12380 - 13663 (-)
Type: CAZyme
Location: 12380 - 13663 (-)
Gene ID: HRGMv2_0889_1_13
Type: CAZyme
Location: 13663 - 14766 (-)
Type: CAZyme
Location: 13663 - 14766 (-)
Gene ID: HRGMv2_0889_1_14
Type: TC
Location: 14768 - 15547 (-)
Type: TC
Location: 14768 - 15547 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_G
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.