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Cluster: HRGMv2_0887_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0887_23 HRGMv2_0887_23_11 14683 17133 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_0887_23 HRGMv2_0887_23_12 17155 17274 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0887_23 HRGMv2_0887_23_13 17358 18077 + GntR
TC HRGMv2_0887_23 HRGMv2_0887_23_14 18384 19700 + 3.A.1.1.45
TC HRGMv2_0887_23 HRGMv2_0887_23_15 19788 20642 + 3.A.1.1.45
TC HRGMv2_0887_23 HRGMv2_0887_23_16 20642 21481 + 3.A.1.1.45
TC HRGMv2_0887_23 HRGMv2_0887_23_17 21550 22749 + 3.A.1.1.22
CAZyme HRGMv2_0887_23 HRGMv2_0887_23_18 23205 25472 - GT35
CAZyme HRGMv2_0887_23 HRGMv2_0887_23_19 25601 27106 - GH77
Gene ID: HRGMv2_0887_23_11
Type: TC
Location: 14683 - 17133 (-)
Gene ID: HRGMv2_0887_23_12
Type:
Location: 17155 - 17274 (+)
Gene ID: HRGMv2_0887_23_13
Type: TF
Location: 17358 - 18077 (+)
Gene ID: HRGMv2_0887_23_14
Type: TC
Location: 18384 - 19700 (+)
Gene ID: HRGMv2_0887_23_15
Type: TC
Location: 19788 - 20642 (+)
Gene ID: HRGMv2_0887_23_16
Type: TC
Location: 20642 - 21481 (+)
Gene ID: HRGMv2_0887_23_17
Type: TC
Location: 21550 - 22749 (+)
Gene ID: HRGMv2_0887_23_18
Type: CAZyme
Location: 23205 - 25472 (-)
Gene ID: HRGMv2_0887_23_19
Type: CAZyme
Location: 25601 - 27106 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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