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Cluster: HRGMv2_0887_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0887_19 HRGMv2_0887_19_10 13631 15313 + 2.A.66.4.4
pfam HRGMv2_0887_19 HRGMv2_0887_19_11 15320 17260 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0887_19 HRGMv2_0887_19_12 17624 19237 + 3.A.1.5.27
TC HRGMv2_0887_19 HRGMv2_0887_19_13 19395 20351 + 3.A.1.5.38
TC HRGMv2_0887_19 HRGMv2_0887_19_14 20355 22370 + 3.A.1.5.25
TC HRGMv2_0887_19 HRGMv2_0887_19_15 22371 23198 + 3.A.1.5.27
CAZyme HRGMv2_0887_19 HRGMv2_0887_19_16 23330 24256 + CE7
Gene ID: HRGMv2_0887_19_10
Type: TC
Location: 13631 - 15313 (+)
Gene ID: HRGMv2_0887_19_11
Type: pfam
Location: 15320 - 17260 (+)
Gene ID: HRGMv2_0887_19_12
Type: TC
Location: 17624 - 19237 (+)
Gene ID: HRGMv2_0887_19_13
Type: TC
Location: 19395 - 20351 (+)
Gene ID: HRGMv2_0887_19_14
Type: TC
Location: 20355 - 22370 (+)
Gene ID: HRGMv2_0887_19_15
Type: TC
Location: 22371 - 23198 (+)
Gene ID: HRGMv2_0887_19_16
Type: CAZyme
Location: 23330 - 24256 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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