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Cluster: HRGMv2_0887_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0887_17 HRGMv2_0887_17_14 12199 12642 + 4.A.6.1.16
pfam HRGMv2_0887_17 HRGMv2_0887_17_15 12642 12923 + YajC
TC HRGMv2_0887_17 HRGMv2_0887_17_16 12960 13442 + 4.A.6.1.4
TC HRGMv2_0887_17 HRGMv2_0887_17_17 13533 14333 + 4.A.6.1.4
TC HRGMv2_0887_17 HRGMv2_0887_17_18 14323 15405 + 4.A.6.1.4
TF HRGMv2_0887_17 HRGMv2_0887_17_19 15591 16322 + GntR
STP HRGMv2_0887_17 HRGMv2_0887_17_20 16437 17603 + SIS | SIS
CAZyme HRGMv2_0887_17 HRGMv2_0887_17_21 17722 18891 + CE9
Gene ID: HRGMv2_0887_17_14
Type: TC
Location: 12199 - 12642 (+)
Gene ID: HRGMv2_0887_17_15
Type: pfam
Location: 12642 - 12923 (+)
Gene ID: HRGMv2_0887_17_16
Type: TC
Location: 12960 - 13442 (+)
Gene ID: HRGMv2_0887_17_17
Type: TC
Location: 13533 - 14333 (+)
Gene ID: HRGMv2_0887_17_18
Type: TC
Location: 14323 - 15405 (+)
Gene ID: HRGMv2_0887_17_19
Type: TF
Location: 15591 - 16322 (+)
Gene ID: HRGMv2_0887_17_20
Type: STP
Location: 16437 - 17603 (+)
Gene ID: HRGMv2_0887_17_21
Type: CAZyme
Location: 17722 - 18891 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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