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Cluster: HRGMv2_0887_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0887_6 HRGMv2_0887_6_61 67160 68536 - GH13_20
TC HRGMv2_0887_6 HRGMv2_0887_6_62 68690 69886 - 2.A.1.2.18
TC HRGMv2_0887_6 HRGMv2_0887_6_63 70007 72367 - 9.A.8.1.6
peptidase HRGMv2_0887_6 HRGMv2_0887_6_64 72840 73739 - S09.UPW
TC HRGMv2_0887_6 HRGMv2_0887_6_65 73983 74546 + 4.A.1.2.6
pfam HRGMv2_0887_6 HRGMv2_0887_6_66 74728 76131 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0887_6 HRGMv2_0887_6_67 76390 77175 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0887_6 HRGMv2_0887_6_68 77336 78316 + 3.A.1.34.1
TC HRGMv2_0887_6 HRGMv2_0887_6_69 78520 79443 + 3.A.1.34.1
TC HRGMv2_0887_6 HRGMv2_0887_6_70 79436 80230 + 3.A.1.34.1
Gene ID: HRGMv2_0887_6_61
Type: CAZyme
Location: 67160 - 68536 (-)
Gene ID: HRGMv2_0887_6_62
Type: TC
Location: 68690 - 69886 (-)
Gene ID: HRGMv2_0887_6_63
Type: TC
Location: 70007 - 72367 (-)
Gene ID: HRGMv2_0887_6_64
Type: peptidase
Location: 72840 - 73739 (-)
Gene ID: HRGMv2_0887_6_65
Type: TC
Location: 73983 - 74546 (+)
Gene ID: HRGMv2_0887_6_66
Type: pfam
Location: 74728 - 76131 (+)
Gene ID: HRGMv2_0887_6_67
Type:
Location: 76390 - 77175 (+)
Gene ID: HRGMv2_0887_6_68
Type: TC
Location: 77336 - 78316 (+)
Gene ID: HRGMv2_0887_6_69
Type: TC
Location: 78520 - 79443 (+)
Gene ID: HRGMv2_0887_6_70
Type: TC
Location: 79436 - 80230 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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