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Cluster: HRGMv2_0885_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0885_21 HRGMv2_0885_21_15 14842 15765 - GT2
NULL(UNKNOWN) HRGMv2_0885_21 HRGMv2_0885_21_16 15779 16273 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0885_21 HRGMv2_0885_21_17 16270 17373 - GT4
pfam HRGMv2_0885_21 HRGMv2_0885_21_18 17621 18511 - ATPgrasp_TupA
CAZyme HRGMv2_0885_21 HRGMv2_0885_21_19 18508 18999 - GT1
pfam HRGMv2_0885_21 HRGMv2_0885_21_20 19012 19485 - Alg14
pfam HRGMv2_0885_21 HRGMv2_0885_21_21 19489 20748 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC HRGMv2_0885_21 HRGMv2_0885_21_22 20787 21536 - 9.B.18.1.2
Gene ID: HRGMv2_0885_21_15
Type: CAZyme
Location: 14842 - 15765 (-)
Gene ID: HRGMv2_0885_21_16
Type:
Location: 15779 - 16273 (-)
Gene ID: HRGMv2_0885_21_17
Type: CAZyme
Location: 16270 - 17373 (-)
Gene ID: HRGMv2_0885_21_18
Type: pfam
Location: 17621 - 18511 (-)
Gene ID: HRGMv2_0885_21_19
Type: CAZyme
Location: 18508 - 18999 (-)
Gene ID: HRGMv2_0885_21_20
Type: pfam
Location: 19012 - 19485 (-)
Gene ID: HRGMv2_0885_21_21
Type: pfam
Location: 19489 - 20748 (-)
Gene ID: HRGMv2_0885_21_22
Type: TC
Location: 20787 - 21536 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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