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Cluster: HRGMv2_0885_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0885_18 HRGMv2_0885_18_17 17823 18749 - CE7
TC HRGMv2_0885_18 HRGMv2_0885_18_18 18881 19708 - 3.A.1.5.27
TC HRGMv2_0885_18 HRGMv2_0885_18_19 19709 21724 - 3.A.1.5.25
TC HRGMv2_0885_18 HRGMv2_0885_18_20 21728 22684 - 3.A.1.5.38
TC HRGMv2_0885_18 HRGMv2_0885_18_21 22840 24453 - 3.A.1.5.27
pfam HRGMv2_0885_18 HRGMv2_0885_18_22 24819 26759 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0885_18 HRGMv2_0885_18_23 26766 28448 - 2.A.66.4.4
Gene ID: HRGMv2_0885_18_17
Type: CAZyme
Location: 17823 - 18749 (-)
Gene ID: HRGMv2_0885_18_18
Type: TC
Location: 18881 - 19708 (-)
Gene ID: HRGMv2_0885_18_19
Type: TC
Location: 19709 - 21724 (-)
Gene ID: HRGMv2_0885_18_20
Type: TC
Location: 21728 - 22684 (-)
Gene ID: HRGMv2_0885_18_21
Type: TC
Location: 22840 - 24453 (-)
Gene ID: HRGMv2_0885_18_22
Type: pfam
Location: 24819 - 26759 (-)
Gene ID: HRGMv2_0885_18_23
Type: TC
Location: 26766 - 28448 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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