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Cluster: HRGMv2_0884_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0884_13 HRGMv2_0884_13_17 17447 18373 - CE7
TC HRGMv2_0884_13 HRGMv2_0884_13_18 18505 19332 - 3.A.1.5.27
TC HRGMv2_0884_13 HRGMv2_0884_13_19 19333 21348 - 3.A.1.5.25
TC HRGMv2_0884_13 HRGMv2_0884_13_20 21352 22308 - 3.A.1.5.38
TC HRGMv2_0884_13 HRGMv2_0884_13_21 22466 24079 - 3.A.1.5.27
pfam HRGMv2_0884_13 HRGMv2_0884_13_22 24444 26384 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0884_13 HRGMv2_0884_13_23 26391 28073 - 2.A.66.4.4
Gene ID: HRGMv2_0884_13_17
Type: CAZyme
Location: 17447 - 18373 (-)
Gene ID: HRGMv2_0884_13_18
Type: TC
Location: 18505 - 19332 (-)
Gene ID: HRGMv2_0884_13_19
Type: TC
Location: 19333 - 21348 (-)
Gene ID: HRGMv2_0884_13_20
Type: TC
Location: 21352 - 22308 (-)
Gene ID: HRGMv2_0884_13_21
Type: TC
Location: 22466 - 24079 (-)
Gene ID: HRGMv2_0884_13_22
Type: pfam
Location: 24444 - 26384 (-)
Gene ID: HRGMv2_0884_13_23
Type: TC
Location: 26391 - 28073 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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