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Cluster: HRGMv2_0884_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0884_11 HRGMv2_0884_11_21 23689 25065 - GH13_20
TC HRGMv2_0884_11 HRGMv2_0884_11_22 25219 26415 - 2.A.1.2.18
TC HRGMv2_0884_11 HRGMv2_0884_11_23 26537 28897 - 9.A.8.1.6
peptidase HRGMv2_0884_11 HRGMv2_0884_11_24 29437 30336 - S09.UPW
TC HRGMv2_0884_11 HRGMv2_0884_11_25 30580 31143 + 4.A.1.2.6
pfam HRGMv2_0884_11 HRGMv2_0884_11_26 31325 32728 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0884_11 HRGMv2_0884_11_27 32989 33777 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0884_11 HRGMv2_0884_11_28 33938 34918 + 3.A.1.34.1
TC HRGMv2_0884_11 HRGMv2_0884_11_29 35122 36045 + 3.A.1.34.1
TC HRGMv2_0884_11 HRGMv2_0884_11_30 36038 36832 + 3.A.1.34.1
Gene ID: HRGMv2_0884_11_21
Type: CAZyme
Location: 23689 - 25065 (-)
Gene ID: HRGMv2_0884_11_22
Type: TC
Location: 25219 - 26415 (-)
Gene ID: HRGMv2_0884_11_23
Type: TC
Location: 26537 - 28897 (-)
Gene ID: HRGMv2_0884_11_24
Type: peptidase
Location: 29437 - 30336 (-)
Gene ID: HRGMv2_0884_11_25
Type: TC
Location: 30580 - 31143 (+)
Gene ID: HRGMv2_0884_11_26
Type: pfam
Location: 31325 - 32728 (+)
Gene ID: HRGMv2_0884_11_27
Type:
Location: 32989 - 33777 (+)
Gene ID: HRGMv2_0884_11_28
Type: TC
Location: 33938 - 34918 (+)
Gene ID: HRGMv2_0884_11_29
Type: TC
Location: 35122 - 36045 (+)
Gene ID: HRGMv2_0884_11_30
Type: TC
Location: 36038 - 36832 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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