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Cluster: HRGMv2_0884_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0884_36 HRGMv2_0884_36_2 896 2317 - GH1
TC HRGMv2_0884_36 HRGMv2_0884_36_3 2393 4171 - 4.A.3.1.1
TF HRGMv2_0884_36 HRGMv2_0884_36_4 4447 5457 + LacI
TC HRGMv2_0884_36 HRGMv2_0884_36_5 5792 7552 - 4.A.3.1.1
CAZyme HRGMv2_0884_36 HRGMv2_0884_36_6 7729 9171 - GH1
TF HRGMv2_0884_36 HRGMv2_0884_36_7 9513 10550 + LacI
CAZyme HRGMv2_0884_36 HRGMv2_0884_36_8 10818 12257 - GH1
TC HRGMv2_0884_36 HRGMv2_0884_36_9 12324 14099 - 4.A.3.1.1
TF HRGMv2_0884_36 HRGMv2_0884_36_10 14457 15461 + LacI
TC HRGMv2_0884_36 HRGMv2_0884_36_11 15676 16014 + 4.A.3.1.2
Gene ID: HRGMv2_0884_36_2
Type: CAZyme
Location: 896 - 2317 (-)
Gene ID: HRGMv2_0884_36_3
Type: TC
Location: 2393 - 4171 (-)
Gene ID: HRGMv2_0884_36_4
Type: TF
Location: 4447 - 5457 (+)
Gene ID: HRGMv2_0884_36_5
Type: TC
Location: 5792 - 7552 (-)
Gene ID: HRGMv2_0884_36_6
Type: CAZyme
Location: 7729 - 9171 (-)
Gene ID: HRGMv2_0884_36_7
Type: TF
Location: 9513 - 10550 (+)
Gene ID: HRGMv2_0884_36_8
Type: CAZyme
Location: 10818 - 12257 (-)
Gene ID: HRGMv2_0884_36_9
Type: TC
Location: 12324 - 14099 (-)
Gene ID: HRGMv2_0884_36_10
Type: TF
Location: 14457 - 15461 (+)
Gene ID: HRGMv2_0884_36_11
Type: TC
Location: 15676 - 16014 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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