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Cluster: HRGMv2_0881_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0881_17 HRGMv2_0881_17_2 284 1528 + 2.A.1.2.25
CAZyme HRGMv2_0881_17 HRGMv2_0881_17_3 1772 3097 + GH4
TC HRGMv2_0881_17 HRGMv2_0881_17_4 3122 4702 + 4.A.1.1.14
TF HRGMv2_0881_17 HRGMv2_0881_17_5 4780 5580 + HTH_6
TC HRGMv2_0881_17 HRGMv2_0881_17_6 5773 7335 - 4.A.1.1.3
CAZyme HRGMv2_0881_17 HRGMv2_0881_17_7 7418 8743 - GH4
Gene ID: HRGMv2_0881_17_2
Type: TC
Location: 284 - 1528 (+)
Gene ID: HRGMv2_0881_17_3
Type: CAZyme
Location: 1772 - 3097 (+)
Gene ID: HRGMv2_0881_17_4
Type: TC
Location: 3122 - 4702 (+)
Gene ID: HRGMv2_0881_17_5
Type: TF
Location: 4780 - 5580 (+)
Gene ID: HRGMv2_0881_17_6
Type: TC
Location: 5773 - 7335 (-)
Gene ID: HRGMv2_0881_17_7
Type: CAZyme
Location: 7418 - 8743 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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