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Cluster: HRGMv2_0880_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0880_12 HRGMv2_0880_12_18 19630 19968 - 4.A.3.1.2
TF HRGMv2_0880_12 HRGMv2_0880_12_19 20183 21187 - LacI
TC HRGMv2_0880_12 HRGMv2_0880_12_20 21544 23319 + 4.A.3.1.1
CAZyme HRGMv2_0880_12 HRGMv2_0880_12_21 23385 24824 + GH1
TF HRGMv2_0880_12 HRGMv2_0880_12_22 25123 26181 - LacI
TC HRGMv2_0880_12 HRGMv2_0880_12_23 26410 28194 + 4.A.3.1.1
CAZyme HRGMv2_0880_12 HRGMv2_0880_12_24 28270 29691 + GH1
Gene ID: HRGMv2_0880_12_18
Type: TC
Location: 19630 - 19968 (-)
Gene ID: HRGMv2_0880_12_19
Type: TF
Location: 20183 - 21187 (-)
Gene ID: HRGMv2_0880_12_20
Type: TC
Location: 21544 - 23319 (+)
Gene ID: HRGMv2_0880_12_21
Type: CAZyme
Location: 23385 - 24824 (+)
Gene ID: HRGMv2_0880_12_22
Type: TF
Location: 25123 - 26181 (-)
Gene ID: HRGMv2_0880_12_23
Type: TC
Location: 26410 - 28194 (+)
Gene ID: HRGMv2_0880_12_24
Type: CAZyme
Location: 28270 - 29691 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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