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Cluster: HRGMv2_0880_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0880_10 HRGMv2_0880_10_27 33921 35597 + 3.A.1.5.35
TC HRGMv2_0880_10 HRGMv2_0880_10_28 35754 36791 + 3.A.1.5.37
TC HRGMv2_0880_10 HRGMv2_0880_10_29 36806 37741 + 3.A.1.5.11
TC HRGMv2_0880_10 HRGMv2_0880_10_30 37744 38835 + 3.A.1.5.34
TC HRGMv2_0880_10 HRGMv2_0880_10_31 38835 39863 + 3.A.1.5.36
STP HRGMv2_0880_10 HRGMv2_0880_10_32 40608 42953 + GAF | SpoIIE
STP HRGMv2_0880_10 HRGMv2_0880_10_33 43032 43778 + STAS
CAZyme HRGMv2_0880_10 HRGMv2_0880_10_34 44751 46484 + GH13_30
Gene ID: HRGMv2_0880_10_27
Type: TC
Location: 33921 - 35597 (+)
Gene ID: HRGMv2_0880_10_28
Type: TC
Location: 35754 - 36791 (+)
Gene ID: HRGMv2_0880_10_29
Type: TC
Location: 36806 - 37741 (+)
Gene ID: HRGMv2_0880_10_30
Type: TC
Location: 37744 - 38835 (+)
Gene ID: HRGMv2_0880_10_31
Type: TC
Location: 38835 - 39863 (+)
Gene ID: HRGMv2_0880_10_32
Type: STP
Location: 40608 - 42953 (+)
Gene ID: HRGMv2_0880_10_33
Type: STP
Location: 43032 - 43778 (+)
Gene ID: HRGMv2_0880_10_34
Type: CAZyme
Location: 44751 - 46484 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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