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Cluster: HRGMv2_0880_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0880_5 HRGMv2_0880_5_65 81383 83197 + GH154
pfam HRGMv2_0880_5 HRGMv2_0880_5_66 83353 83784 + EIIA-man
TC HRGMv2_0880_5 HRGMv2_0880_5_67 83829 84311 + 4.A.6.1.11
TC HRGMv2_0880_5 HRGMv2_0880_5_68 84382 85251 + 4.A.6.1.11
TC HRGMv2_0880_5 HRGMv2_0880_5_69 85244 86125 + 4.A.6.1.19
NULL(UNKNOWN) HRGMv2_0880_5 HRGMv2_0880_5_70 86205 86849 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0880_5 HRGMv2_0880_5_71 86830 87981 + GH88
pfam HRGMv2_0880_5 HRGMv2_0880_5_72 87975 88817 + Hydrolase | S6PP | Hydrolase_3
CAZyme HRGMv2_0880_5 HRGMv2_0880_5_73 88822 90453 + CBM91 | GH43_11
NULL(UNKNOWN) HRGMv2_0880_5 HRGMv2_0880_5_74 90470 91282 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0880_5 HRGMv2_0880_5_75 91275 92228 + GH43_24
CAZyme HRGMv2_0880_5 HRGMv2_0880_5_76 92247 93470 + GH28
CAZyme HRGMv2_0880_5 HRGMv2_0880_5_77 93479 95188 + GH154
TC HRGMv2_0880_5 HRGMv2_0880_5_78 95441 96250 - 3.A.1.15.5
TC HRGMv2_0880_5 HRGMv2_0880_5_79 96243 96902 - 3.A.1.15.3
pfam HRGMv2_0880_5 HRGMv2_0880_5_80 96905 98875 - Sulfatase
TC HRGMv2_0880_5 HRGMv2_0880_5_81 98888 99892 - 3.A.1.15.11
Gene ID: HRGMv2_0880_5_65
Type: CAZyme
Location: 81383 - 83197 (+)
Gene ID: HRGMv2_0880_5_66
Type: pfam
Location: 83353 - 83784 (+)
Gene ID: HRGMv2_0880_5_67
Type: TC
Location: 83829 - 84311 (+)
Gene ID: HRGMv2_0880_5_68
Type: TC
Location: 84382 - 85251 (+)
Gene ID: HRGMv2_0880_5_69
Type: TC
Location: 85244 - 86125 (+)
Gene ID: HRGMv2_0880_5_70
Type:
Location: 86205 - 86849 (+)
Gene ID: HRGMv2_0880_5_71
Type: CAZyme
Location: 86830 - 87981 (+)
Gene ID: HRGMv2_0880_5_72
Type: pfam
Location: 87975 - 88817 (+)
Gene ID: HRGMv2_0880_5_73
Type: CAZyme
Location: 88822 - 90453 (+)
Gene ID: HRGMv2_0880_5_74
Type:
Location: 90470 - 91282 (+)
Gene ID: HRGMv2_0880_5_75
Type: CAZyme
Location: 91275 - 92228 (+)
Gene ID: HRGMv2_0880_5_76
Type: CAZyme
Location: 92247 - 93470 (+)
Gene ID: HRGMv2_0880_5_77
Type: CAZyme
Location: 93479 - 95188 (+)
Gene ID: HRGMv2_0880_5_78
Type: TC
Location: 95441 - 96250 (-)
Gene ID: HRGMv2_0880_5_79
Type: TC
Location: 96243 - 96902 (-)
Gene ID: HRGMv2_0880_5_80
Type: pfam
Location: 96905 - 98875 (-)
Gene ID: HRGMv2_0880_5_81
Type: TC
Location: 98888 - 99892 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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