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Cluster: HRGMv2_0879_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0879_7 HRGMv2_0879_7_39 51931 53490 + 2.A.2.5.1
CAZyme HRGMv2_0879_7 HRGMv2_0879_7_40 53605 55200 + GH28
peptidase HRGMv2_0879_7 HRGMv2_0879_7_41 55296 56105 + S09.UPW
CAZyme HRGMv2_0879_7 HRGMv2_0879_7_42 56102 58267 + CE19 | CE8
pfam HRGMv2_0879_7 HRGMv2_0879_7_43 58337 59005 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_0879_7 HRGMv2_0879_7_44 59113 60351 + GH105
Gene ID: HRGMv2_0879_7_39
Type: TC
Location: 51931 - 53490 (+)
Gene ID: HRGMv2_0879_7_40
Type: CAZyme
Location: 53605 - 55200 (+)
Gene ID: HRGMv2_0879_7_41
Type: peptidase
Location: 55296 - 56105 (+)
Gene ID: HRGMv2_0879_7_42
Type: CAZyme
Location: 56102 - 58267 (+)
Gene ID: HRGMv2_0879_7_43
Type: pfam
Location: 58337 - 59005 (+)
Gene ID: HRGMv2_0879_7_44
Type: CAZyme
Location: 59113 - 60351 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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