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Cluster: HRGMv2_0879_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0879_26 HRGMv2_0879_26_3 1549 3999 - 4.A.1.1.8
TF HRGMv2_0879_26 HRGMv2_0879_26_4 4229 4948 + GntR
TC HRGMv2_0879_26 HRGMv2_0879_26_5 5255 6571 + 3.A.1.1.45
TC HRGMv2_0879_26 HRGMv2_0879_26_6 6659 7513 + 3.A.1.1.45
TC HRGMv2_0879_26 HRGMv2_0879_26_7 7513 8352 + 3.A.1.1.45
TC HRGMv2_0879_26 HRGMv2_0879_26_8 8420 9619 + 3.A.1.1.22
CAZyme HRGMv2_0879_26 HRGMv2_0879_26_9 10156 12423 - GT35
CAZyme HRGMv2_0879_26 HRGMv2_0879_26_10 12552 14057 - GH77
Gene ID: HRGMv2_0879_26_3
Type: TC
Location: 1549 - 3999 (-)
Gene ID: HRGMv2_0879_26_4
Type: TF
Location: 4229 - 4948 (+)
Gene ID: HRGMv2_0879_26_5
Type: TC
Location: 5255 - 6571 (+)
Gene ID: HRGMv2_0879_26_6
Type: TC
Location: 6659 - 7513 (+)
Gene ID: HRGMv2_0879_26_7
Type: TC
Location: 7513 - 8352 (+)
Gene ID: HRGMv2_0879_26_8
Type: TC
Location: 8420 - 9619 (+)
Gene ID: HRGMv2_0879_26_9
Type: CAZyme
Location: 10156 - 12423 (-)
Gene ID: HRGMv2_0879_26_10
Type: CAZyme
Location: 12552 - 14057 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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