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Cluster: HRGMv2_0877_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0877_22 HRGMv2_0877_22_16 14288 15793 + GH77
CAZyme HRGMv2_0877_22 HRGMv2_0877_22_17 15923 18190 + GT35
TC HRGMv2_0877_22 HRGMv2_0877_22_18 18725 19924 - 3.A.1.1.22
TC HRGMv2_0877_22 HRGMv2_0877_22_19 19992 20831 - 3.A.1.1.45
TC HRGMv2_0877_22 HRGMv2_0877_22_20 20831 21685 - 3.A.1.1.45
TC HRGMv2_0877_22 HRGMv2_0877_22_21 21777 23093 - 3.A.1.1.45
TF HRGMv2_0877_22 HRGMv2_0877_22_22 23400 24119 - GntR
TC HRGMv2_0877_22 HRGMv2_0877_22_23 24347 26797 + 4.A.1.1.8
Gene ID: HRGMv2_0877_22_16
Type: CAZyme
Location: 14288 - 15793 (+)
Gene ID: HRGMv2_0877_22_17
Type: CAZyme
Location: 15923 - 18190 (+)
Gene ID: HRGMv2_0877_22_18
Type: TC
Location: 18725 - 19924 (-)
Gene ID: HRGMv2_0877_22_19
Type: TC
Location: 19992 - 20831 (-)
Gene ID: HRGMv2_0877_22_20
Type: TC
Location: 20831 - 21685 (-)
Gene ID: HRGMv2_0877_22_21
Type: TC
Location: 21777 - 23093 (-)
Gene ID: HRGMv2_0877_22_22
Type: TF
Location: 23400 - 24119 (-)
Gene ID: HRGMv2_0877_22_23
Type: TC
Location: 24347 - 26797 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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