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Cluster: HRGMv2_0877_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0877_16 HRGMv2_0877_16_10 13588 15891 + 2.A.66.4.4
pfam HRGMv2_0877_16 HRGMv2_0877_16_11 15898 17838 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0877_16 HRGMv2_0877_16_12 18204 19817 + 3.A.1.5.27
TC HRGMv2_0877_16 HRGMv2_0877_16_13 19973 20929 + 3.A.1.5.38
TC HRGMv2_0877_16 HRGMv2_0877_16_14 20933 22948 + 3.A.1.5.25
TC HRGMv2_0877_16 HRGMv2_0877_16_15 22949 23776 + 3.A.1.5.27
CAZyme HRGMv2_0877_16 HRGMv2_0877_16_16 23908 24834 + CE7
Gene ID: HRGMv2_0877_16_10
Type: TC
Location: 13588 - 15891 (+)
Gene ID: HRGMv2_0877_16_11
Type: pfam
Location: 15898 - 17838 (+)
Gene ID: HRGMv2_0877_16_12
Type: TC
Location: 18204 - 19817 (+)
Gene ID: HRGMv2_0877_16_13
Type: TC
Location: 19973 - 20929 (+)
Gene ID: HRGMv2_0877_16_14
Type: TC
Location: 20933 - 22948 (+)
Gene ID: HRGMv2_0877_16_15
Type: TC
Location: 22949 - 23776 (+)
Gene ID: HRGMv2_0877_16_16
Type: CAZyme
Location: 23908 - 24834 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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