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Cluster: HRGMv2_0877_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0877_10 HRGMv2_0877_10_61 70790 71584 - 3.A.1.34.1
TC HRGMv2_0877_10 HRGMv2_0877_10_62 71577 72500 - 3.A.1.34.1
TC HRGMv2_0877_10 HRGMv2_0877_10_63 72705 73685 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0877_10 HRGMv2_0877_10_64 73846 74631 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0877_10 HRGMv2_0877_10_65 74890 76293 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0877_10 HRGMv2_0877_10_66 76474 77037 - 4.A.1.2.6
peptidase HRGMv2_0877_10 HRGMv2_0877_10_67 77282 78184 + S09.UPW
TC HRGMv2_0877_10 HRGMv2_0877_10_68 78369 80729 + 9.A.8.1.6
TC HRGMv2_0877_10 HRGMv2_0877_10_69 80851 82047 + 2.A.1.2.18
CAZyme HRGMv2_0877_10 HRGMv2_0877_10_70 82202 83578 + GH13_20
Gene ID: HRGMv2_0877_10_61
Type: TC
Location: 70790 - 71584 (-)
Gene ID: HRGMv2_0877_10_62
Type: TC
Location: 71577 - 72500 (-)
Gene ID: HRGMv2_0877_10_63
Type: TC
Location: 72705 - 73685 (-)
Gene ID: HRGMv2_0877_10_64
Type:
Location: 73846 - 74631 (-)
Gene ID: HRGMv2_0877_10_65
Type: pfam
Location: 74890 - 76293 (-)
Gene ID: HRGMv2_0877_10_66
Type: TC
Location: 76474 - 77037 (-)
Gene ID: HRGMv2_0877_10_67
Type: peptidase
Location: 77282 - 78184 (+)
Gene ID: HRGMv2_0877_10_68
Type: TC
Location: 78369 - 80729 (+)
Gene ID: HRGMv2_0877_10_69
Type: TC
Location: 80851 - 82047 (+)
Gene ID: HRGMv2_0877_10_70
Type: CAZyme
Location: 82202 - 83578 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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