dbCAN Logo

Cluster: HRGMv2_0876_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0876_3 HRGMv2_0876_3_25 31898 33574 + 3.A.1.5.35
TC HRGMv2_0876_3 HRGMv2_0876_3_26 33731 34768 + 3.A.1.5.37
TC HRGMv2_0876_3 HRGMv2_0876_3_27 34783 35718 + 3.A.1.5.11
TC HRGMv2_0876_3 HRGMv2_0876_3_28 35721 36812 + 3.A.1.5.34
TC HRGMv2_0876_3 HRGMv2_0876_3_29 36812 37840 + 3.A.1.5.36
STP HRGMv2_0876_3 HRGMv2_0876_3_30 38583 40928 + GAF | SpoIIE
STP HRGMv2_0876_3 HRGMv2_0876_3_31 41007 41753 + STAS
CAZyme HRGMv2_0876_3 HRGMv2_0876_3_32 42339 44072 + GH13_30
Gene ID: HRGMv2_0876_3_25
Type: TC
Location: 31898 - 33574 (+)
Gene ID: HRGMv2_0876_3_26
Type: TC
Location: 33731 - 34768 (+)
Gene ID: HRGMv2_0876_3_27
Type: TC
Location: 34783 - 35718 (+)
Gene ID: HRGMv2_0876_3_28
Type: TC
Location: 35721 - 36812 (+)
Gene ID: HRGMv2_0876_3_29
Type: TC
Location: 36812 - 37840 (+)
Gene ID: HRGMv2_0876_3_30
Type: STP
Location: 38583 - 40928 (+)
Gene ID: HRGMv2_0876_3_31
Type: STP
Location: 41007 - 41753 (+)
Gene ID: HRGMv2_0876_3_32
Type: CAZyme
Location: 42339 - 44072 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List