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Cluster: HRGMv2_0876_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0876_3 HRGMv2_0876_3_7 9949 11631 + 2.A.66.4.4
pfam HRGMv2_0876_3 HRGMv2_0876_3_8 11638 13578 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0876_3 HRGMv2_0876_3_9 13942 15555 + 3.A.1.5.27
TC HRGMv2_0876_3 HRGMv2_0876_3_10 15711 16667 + 3.A.1.5.38
TC HRGMv2_0876_3 HRGMv2_0876_3_11 16671 18686 + 3.A.1.5.25
TC HRGMv2_0876_3 HRGMv2_0876_3_12 18687 19514 + 3.A.1.5.27
CAZyme HRGMv2_0876_3 HRGMv2_0876_3_13 19646 20572 + CE7
Gene ID: HRGMv2_0876_3_7
Type: TC
Location: 9949 - 11631 (+)
Gene ID: HRGMv2_0876_3_8
Type: pfam
Location: 11638 - 13578 (+)
Gene ID: HRGMv2_0876_3_9
Type: TC
Location: 13942 - 15555 (+)
Gene ID: HRGMv2_0876_3_10
Type: TC
Location: 15711 - 16667 (+)
Gene ID: HRGMv2_0876_3_11
Type: TC
Location: 16671 - 18686 (+)
Gene ID: HRGMv2_0876_3_12
Type: TC
Location: 18687 - 19514 (+)
Gene ID: HRGMv2_0876_3_13
Type: CAZyme
Location: 19646 - 20572 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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