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Cluster: HRGMv2_0876_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0876_17 HRGMv2_0876_17_14 11996 13501 + GH77
CAZyme HRGMv2_0876_17 HRGMv2_0876_17_15 13631 15898 + GT35
TC HRGMv2_0876_17 HRGMv2_0876_17_16 16434 17633 - 3.A.1.1.22
TC HRGMv2_0876_17 HRGMv2_0876_17_17 17701 18540 - 3.A.1.1.45
TC HRGMv2_0876_17 HRGMv2_0876_17_18 18540 19394 - 3.A.1.1.45
TC HRGMv2_0876_17 HRGMv2_0876_17_19 19482 20798 - 3.A.1.1.45
TF HRGMv2_0876_17 HRGMv2_0876_17_20 21105 21824 - GntR
TC HRGMv2_0876_17 HRGMv2_0876_17_21 22054 24504 + 4.A.1.1.8
Gene ID: HRGMv2_0876_17_14
Type: CAZyme
Location: 11996 - 13501 (+)
Gene ID: HRGMv2_0876_17_15
Type: CAZyme
Location: 13631 - 15898 (+)
Gene ID: HRGMv2_0876_17_16
Type: TC
Location: 16434 - 17633 (-)
Gene ID: HRGMv2_0876_17_17
Type: TC
Location: 17701 - 18540 (-)
Gene ID: HRGMv2_0876_17_18
Type: TC
Location: 18540 - 19394 (-)
Gene ID: HRGMv2_0876_17_19
Type: TC
Location: 19482 - 20798 (-)
Gene ID: HRGMv2_0876_17_20
Type: TF
Location: 21105 - 21824 (-)
Gene ID: HRGMv2_0876_17_21
Type: TC
Location: 22054 - 24504 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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