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Cluster: HRGMv2_0876_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0876_10 HRGMv2_0876_10_46 48219 48662 + 4.A.6.1.16
pfam HRGMv2_0876_10 HRGMv2_0876_10_47 48662 48943 + YajC
TC HRGMv2_0876_10 HRGMv2_0876_10_48 48980 49462 + 4.A.6.1.4
TC HRGMv2_0876_10 HRGMv2_0876_10_49 49553 50353 + 4.A.6.1.4
TC HRGMv2_0876_10 HRGMv2_0876_10_50 50343 51425 + 4.A.6.1.4
TF HRGMv2_0876_10 HRGMv2_0876_10_51 51610 52341 + GntR
STP HRGMv2_0876_10 HRGMv2_0876_10_52 52456 53622 + SIS | SIS
CAZyme HRGMv2_0876_10 HRGMv2_0876_10_53 53740 54909 + CE9
Gene ID: HRGMv2_0876_10_46
Type: TC
Location: 48219 - 48662 (+)
Gene ID: HRGMv2_0876_10_47
Type: pfam
Location: 48662 - 48943 (+)
Gene ID: HRGMv2_0876_10_48
Type: TC
Location: 48980 - 49462 (+)
Gene ID: HRGMv2_0876_10_49
Type: TC
Location: 49553 - 50353 (+)
Gene ID: HRGMv2_0876_10_50
Type: TC
Location: 50343 - 51425 (+)
Gene ID: HRGMv2_0876_10_51
Type: TF
Location: 51610 - 52341 (+)
Gene ID: HRGMv2_0876_10_52
Type: STP
Location: 52456 - 53622 (+)
Gene ID: HRGMv2_0876_10_53
Type: CAZyme
Location: 53740 - 54909 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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