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Cluster: HRGMv2_0876_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0876_10 HRGMv2_0876_10_15 16325 17725 + GH1
TC HRGMv2_0876_10 HRGMv2_0876_10_16 17846 19189 + 4.A.3.2.9
TC HRGMv2_0876_10 HRGMv2_0876_10_17 19351 19653 + 4.A.3.2.9
TC HRGMv2_0876_10 HRGMv2_0876_10_18 19663 19995 + 4.A.3.2.3
STP HRGMv2_0876_10 HRGMv2_0876_10_19 20237 21190 + Glucokinase
pfam HRGMv2_0876_10 HRGMv2_0876_10_20 21338 22261 + DHH | DHHA2
TC HRGMv2_0876_10 HRGMv2_0876_10_21 22529 23887 + 2.A.33.1.1
Gene ID: HRGMv2_0876_10_15
Type: CAZyme
Location: 16325 - 17725 (+)
Gene ID: HRGMv2_0876_10_16
Type: TC
Location: 17846 - 19189 (+)
Gene ID: HRGMv2_0876_10_17
Type: TC
Location: 19351 - 19653 (+)
Gene ID: HRGMv2_0876_10_18
Type: TC
Location: 19663 - 19995 (+)
Gene ID: HRGMv2_0876_10_19
Type: STP
Location: 20237 - 21190 (+)
Gene ID: HRGMv2_0876_10_20
Type: pfam
Location: 21338 - 22261 (+)
Gene ID: HRGMv2_0876_10_21
Type: TC
Location: 22529 - 23887 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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