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Cluster: HRGMv2_0876_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0876_1 HRGMv2_0876_1_58 65376 66752 - GH13_20
TC HRGMv2_0876_1 HRGMv2_0876_1_59 66907 68103 - 2.A.1.2.18
TC HRGMv2_0876_1 HRGMv2_0876_1_60 68224 70584 - 9.A.8.1.6
peptidase HRGMv2_0876_1 HRGMv2_0876_1_61 70995 71894 - S09.UPW
TC HRGMv2_0876_1 HRGMv2_0876_1_62 72138 72701 + 4.A.1.2.6
pfam HRGMv2_0876_1 HRGMv2_0876_1_63 72883 74286 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0876_1 HRGMv2_0876_1_64 74545 75330 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0876_1 HRGMv2_0876_1_65 75491 76471 + 3.A.1.34.1
TC HRGMv2_0876_1 HRGMv2_0876_1_66 76675 77598 + 3.A.1.34.1
TC HRGMv2_0876_1 HRGMv2_0876_1_67 77591 78385 + 3.A.1.34.1
Gene ID: HRGMv2_0876_1_58
Type: CAZyme
Location: 65376 - 66752 (-)
Gene ID: HRGMv2_0876_1_59
Type: TC
Location: 66907 - 68103 (-)
Gene ID: HRGMv2_0876_1_60
Type: TC
Location: 68224 - 70584 (-)
Gene ID: HRGMv2_0876_1_61
Type: peptidase
Location: 70995 - 71894 (-)
Gene ID: HRGMv2_0876_1_62
Type: TC
Location: 72138 - 72701 (+)
Gene ID: HRGMv2_0876_1_63
Type: pfam
Location: 72883 - 74286 (+)
Gene ID: HRGMv2_0876_1_64
Type:
Location: 74545 - 75330 (+)
Gene ID: HRGMv2_0876_1_65
Type: TC
Location: 75491 - 76471 (+)
Gene ID: HRGMv2_0876_1_66
Type: TC
Location: 76675 - 77598 (+)
Gene ID: HRGMv2_0876_1_67
Type: TC
Location: 77591 - 78385 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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