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Cluster: HRGMv2_0874_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0874_27 HRGMv2_0874_27_10 8913 10418 + GH77
CAZyme HRGMv2_0874_27 HRGMv2_0874_27_11 10547 12814 + GT35
TC HRGMv2_0874_27 HRGMv2_0874_27_12 13270 14469 - 3.A.1.1.22
TC HRGMv2_0874_27 HRGMv2_0874_27_13 14538 15377 - 3.A.1.1.45
TC HRGMv2_0874_27 HRGMv2_0874_27_14 15377 16231 - 3.A.1.1.45
TC HRGMv2_0874_27 HRGMv2_0874_27_15 16319 17635 - 3.A.1.1.45
TF HRGMv2_0874_27 HRGMv2_0874_27_16 17942 18661 - GntR
TC HRGMv2_0874_27 HRGMv2_0874_27_17 18886 21336 + 4.A.1.1.8
Gene ID: HRGMv2_0874_27_10
Type: CAZyme
Location: 8913 - 10418 (+)
Gene ID: HRGMv2_0874_27_11
Type: CAZyme
Location: 10547 - 12814 (+)
Gene ID: HRGMv2_0874_27_12
Type: TC
Location: 13270 - 14469 (-)
Gene ID: HRGMv2_0874_27_13
Type: TC
Location: 14538 - 15377 (-)
Gene ID: HRGMv2_0874_27_14
Type: TC
Location: 15377 - 16231 (-)
Gene ID: HRGMv2_0874_27_15
Type: TC
Location: 16319 - 17635 (-)
Gene ID: HRGMv2_0874_27_16
Type: TF
Location: 17942 - 18661 (-)
Gene ID: HRGMv2_0874_27_17
Type: TC
Location: 18886 - 21336 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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