dbCAN Logo

Cluster: HRGMv2_0874_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0874_26 HRGMv2_0874_26_9 13711 15087 - GH13_20
TC HRGMv2_0874_26 HRGMv2_0874_26_10 15241 16437 - 2.A.1.2.18
TC HRGMv2_0874_26 HRGMv2_0874_26_11 16562 18922 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_0874_26 HRGMv2_0874_26_12 19044 19364 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0874_26 HRGMv2_0874_26_13 19412 20311 - S09.UPW
TC HRGMv2_0874_26 HRGMv2_0874_26_14 20480 21121 + 4.A.1.2.6
pfam HRGMv2_0874_26 HRGMv2_0874_26_15 21302 22705 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0874_26 HRGMv2_0874_26_16 22955 23740 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0874_26 HRGMv2_0874_26_17 23901 24797 + 3.A.1.34.1
Gene ID: HRGMv2_0874_26_9
Type: CAZyme
Location: 13711 - 15087 (-)
Gene ID: HRGMv2_0874_26_10
Type: TC
Location: 15241 - 16437 (-)
Gene ID: HRGMv2_0874_26_11
Type: TC
Location: 16562 - 18922 (-)
Gene ID: HRGMv2_0874_26_12
Type:
Location: 19044 - 19364 (-)
Gene ID: HRGMv2_0874_26_13
Type: peptidase
Location: 19412 - 20311 (-)
Gene ID: HRGMv2_0874_26_14
Type: TC
Location: 20480 - 21121 (+)
Gene ID: HRGMv2_0874_26_15
Type: pfam
Location: 21302 - 22705 (+)
Gene ID: HRGMv2_0874_26_16
Type:
Location: 22955 - 23740 (+)
Gene ID: HRGMv2_0874_26_17
Type: TC
Location: 23901 - 24797 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List