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Cluster: HRGMv2_0872_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0872_1 HRGMv2_0872_1_240 269565 271904 - 3.A.3.5.15
TC HRGMv2_0872_1 HRGMv2_0872_1_241 272465 274735 + 1.I.1.1.3
STP HRGMv2_0872_1 HRGMv2_0872_1_242 275361 276122 + Fer4
TC HRGMv2_0872_1 HRGMv2_0872_1_243 276466 276978 + 4.A.1.2.5
pfam HRGMv2_0872_1 HRGMv2_0872_1_244 276997 277851 + PRD | PRD | CAT_RBD
TC HRGMv2_0872_1 HRGMv2_0872_1_245 277951 279567 + 4.A.1.1.3
CAZyme HRGMv2_0872_1 HRGMv2_0872_1_246 279571 280953 + GH4
Gene ID: HRGMv2_0872_1_240
Type: TC
Location: 269565 - 271904 (-)
Gene ID: HRGMv2_0872_1_241
Type: TC
Location: 272465 - 274735 (+)
Gene ID: HRGMv2_0872_1_242
Type: STP
Location: 275361 - 276122 (+)
Gene ID: HRGMv2_0872_1_243
Type: TC
Location: 276466 - 276978 (+)
Gene ID: HRGMv2_0872_1_244
Type: pfam
Location: 276997 - 277851 (+)
Gene ID: HRGMv2_0872_1_245
Type: TC
Location: 277951 - 279567 (+)
Gene ID: HRGMv2_0872_1_246
Type: CAZyme
Location: 279571 - 280953 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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