dbCAN Logo

Cluster: HRGMv2_0872_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0872_16 HRGMv2_0872_16_10 13595 15277 + 2.A.66.4.4
pfam HRGMv2_0872_16 HRGMv2_0872_16_11 15284 17224 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0872_16 HRGMv2_0872_16_12 17590 19203 + 3.A.1.5.27
TC HRGMv2_0872_16 HRGMv2_0872_16_13 19361 20317 + 3.A.1.5.38
TC HRGMv2_0872_16 HRGMv2_0872_16_14 20321 22336 + 3.A.1.5.25
TC HRGMv2_0872_16 HRGMv2_0872_16_15 22337 23164 + 3.A.1.5.27
CAZyme HRGMv2_0872_16 HRGMv2_0872_16_16 23296 24222 + CE7
Gene ID: HRGMv2_0872_16_10
Type: TC
Location: 13595 - 15277 (+)
Gene ID: HRGMv2_0872_16_11
Type: pfam
Location: 15284 - 17224 (+)
Gene ID: HRGMv2_0872_16_12
Type: TC
Location: 17590 - 19203 (+)
Gene ID: HRGMv2_0872_16_13
Type: TC
Location: 19361 - 20317 (+)
Gene ID: HRGMv2_0872_16_14
Type: TC
Location: 20321 - 22336 (+)
Gene ID: HRGMv2_0872_16_15
Type: TC
Location: 22337 - 23164 (+)
Gene ID: HRGMv2_0872_16_16
Type: CAZyme
Location: 23296 - 24222 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List