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Cluster: HRGMv2_0872_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0872_13 HRGMv2_0872_13_1 121 459 - 4.A.3.1.2
TF HRGMv2_0872_13 HRGMv2_0872_13_2 674 1678 - LacI
TC HRGMv2_0872_13 HRGMv2_0872_13_3 2036 3793 + 4.A.3.1.1
CAZyme HRGMv2_0872_13 HRGMv2_0872_13_4 3860 5299 + GH1
TF HRGMv2_0872_13 HRGMv2_0872_13_5 5652 6662 - LacI
TC HRGMv2_0872_13 HRGMv2_0872_13_6 6939 8717 + 4.A.3.1.1
CAZyme HRGMv2_0872_13 HRGMv2_0872_13_7 8793 10214 + GH1
Gene ID: HRGMv2_0872_13_1
Type: TC
Location: 121 - 459 (-)
Gene ID: HRGMv2_0872_13_2
Type: TF
Location: 674 - 1678 (-)
Gene ID: HRGMv2_0872_13_3
Type: TC
Location: 2036 - 3793 (+)
Gene ID: HRGMv2_0872_13_4
Type: CAZyme
Location: 3860 - 5299 (+)
Gene ID: HRGMv2_0872_13_5
Type: TF
Location: 5652 - 6662 (-)
Gene ID: HRGMv2_0872_13_6
Type: TC
Location: 6939 - 8717 (+)
Gene ID: HRGMv2_0872_13_7
Type: CAZyme
Location: 8793 - 10214 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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