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Cluster: HRGMv2_0872_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0872_10 HRGMv2_0872_10_11 20456 22906 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_0872_10 HRGMv2_0872_10_12 22928 23047 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0872_10 HRGMv2_0872_10_13 23131 23850 + GntR
TC HRGMv2_0872_10 HRGMv2_0872_10_14 24157 25473 + 3.A.1.1.45
TC HRGMv2_0872_10 HRGMv2_0872_10_15 25561 26415 + 3.A.1.1.45
TC HRGMv2_0872_10 HRGMv2_0872_10_16 26415 27254 + 3.A.1.1.45
TC HRGMv2_0872_10 HRGMv2_0872_10_17 27323 28522 + 3.A.1.1.22
CAZyme HRGMv2_0872_10 HRGMv2_0872_10_18 28980 31247 - GT35
CAZyme HRGMv2_0872_10 HRGMv2_0872_10_19 31376 32881 - GH77
Gene ID: HRGMv2_0872_10_11
Type: TC
Location: 20456 - 22906 (-)
Gene ID: HRGMv2_0872_10_12
Type:
Location: 22928 - 23047 (+)
Gene ID: HRGMv2_0872_10_13
Type: TF
Location: 23131 - 23850 (+)
Gene ID: HRGMv2_0872_10_14
Type: TC
Location: 24157 - 25473 (+)
Gene ID: HRGMv2_0872_10_15
Type: TC
Location: 25561 - 26415 (+)
Gene ID: HRGMv2_0872_10_16
Type: TC
Location: 26415 - 27254 (+)
Gene ID: HRGMv2_0872_10_17
Type: TC
Location: 27323 - 28522 (+)
Gene ID: HRGMv2_0872_10_18
Type: CAZyme
Location: 28980 - 31247 (-)
Gene ID: HRGMv2_0872_10_19
Type: CAZyme
Location: 31376 - 32881 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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