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Cluster: HRGMv2_0871_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0871_1 HRGMv2_0871_1_134 158659 158997 - 4.A.3.1.2
TF HRGMv2_0871_1 HRGMv2_0871_1_135 159212 160216 - LacI
TC HRGMv2_0871_1 HRGMv2_0871_1_136 160574 162340 + 4.A.3.1.1
CAZyme HRGMv2_0871_1 HRGMv2_0871_1_137 162407 163846 + GH1
TF HRGMv2_0871_1 HRGMv2_0871_1_138 164114 165151 - LacI
CAZyme HRGMv2_0871_1 HRGMv2_0871_1_139 165493 166935 + GH1
TC HRGMv2_0871_1 HRGMv2_0871_1_140 167112 168872 + 4.A.3.1.1
TF HRGMv2_0871_1 HRGMv2_0871_1_141 169207 170217 - LacI
TC HRGMv2_0871_1 HRGMv2_0871_1_142 170470 172248 + 4.A.3.1.1
CAZyme HRGMv2_0871_1 HRGMv2_0871_1_143 172324 173745 + GH1
Gene ID: HRGMv2_0871_1_134
Type: TC
Location: 158659 - 158997 (-)
Gene ID: HRGMv2_0871_1_135
Type: TF
Location: 159212 - 160216 (-)
Gene ID: HRGMv2_0871_1_136
Type: TC
Location: 160574 - 162340 (+)
Gene ID: HRGMv2_0871_1_137
Type: CAZyme
Location: 162407 - 163846 (+)
Gene ID: HRGMv2_0871_1_138
Type: TF
Location: 164114 - 165151 (-)
Gene ID: HRGMv2_0871_1_139
Type: CAZyme
Location: 165493 - 166935 (+)
Gene ID: HRGMv2_0871_1_140
Type: TC
Location: 167112 - 168872 (+)
Gene ID: HRGMv2_0871_1_141
Type: TF
Location: 169207 - 170217 (-)
Gene ID: HRGMv2_0871_1_142
Type: TC
Location: 170470 - 172248 (+)
Gene ID: HRGMv2_0871_1_143
Type: CAZyme
Location: 172324 - 173745 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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