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Cluster: HRGMv2_0871_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0871_21 HRGMv2_0871_21_1 1 1449 + GH77
CAZyme HRGMv2_0871_21 HRGMv2_0871_21_2 1578 3845 + GT35
TC HRGMv2_0871_21 HRGMv2_0871_21_3 4381 5580 - 3.A.1.1.22
TC HRGMv2_0871_21 HRGMv2_0871_21_4 5649 6488 - 3.A.1.1.45
TC HRGMv2_0871_21 HRGMv2_0871_21_5 6488 7342 - 3.A.1.1.45
TC HRGMv2_0871_21 HRGMv2_0871_21_6 7430 8746 - 3.A.1.1.45
TF HRGMv2_0871_21 HRGMv2_0871_21_7 9053 9772 - GntR
TC HRGMv2_0871_21 HRGMv2_0871_21_8 10000 12450 + 4.A.1.1.8
Gene ID: HRGMv2_0871_21_1
Type: CAZyme
Location: 1 - 1449 (+)
Gene ID: HRGMv2_0871_21_2
Type: CAZyme
Location: 1578 - 3845 (+)
Gene ID: HRGMv2_0871_21_3
Type: TC
Location: 4381 - 5580 (-)
Gene ID: HRGMv2_0871_21_4
Type: TC
Location: 5649 - 6488 (-)
Gene ID: HRGMv2_0871_21_5
Type: TC
Location: 6488 - 7342 (-)
Gene ID: HRGMv2_0871_21_6
Type: TC
Location: 7430 - 8746 (-)
Gene ID: HRGMv2_0871_21_7
Type: TF
Location: 9053 - 9772 (-)
Gene ID: HRGMv2_0871_21_8
Type: TC
Location: 10000 - 12450 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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