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Cluster: HRGMv2_0871_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0871_16 HRGMv2_0871_16_14 14231 15607 - 3.A.1.17.10
NULL(UNKNOWN) HRGMv2_0871_16 HRGMv2_0871_16_15 15611 16666 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0871_16 HRGMv2_0871_16_16 16669 18480 - 3.D.1.5.1
STP HRGMv2_0871_16 HRGMv2_0871_16_17 18474 20306 - Pyr_redox_2
CAZyme HRGMv2_0871_16 HRGMv2_0871_16_18 20562 21944 - GH4
TC HRGMv2_0871_16 HRGMv2_0871_16_19 21948 23564 - 4.A.1.1.3
pfam HRGMv2_0871_16 HRGMv2_0871_16_20 23664 24530 - PRD | PRD | CAT_RBD
TC HRGMv2_0871_16 HRGMv2_0871_16_21 24537 25049 - 4.A.1.2.5
STP HRGMv2_0871_16 HRGMv2_0871_16_22 25393 26154 - Fer4
TC HRGMv2_0871_16 HRGMv2_0871_16_23 26773 29022 - 1.I.1.1.3
STP HRGMv2_0871_16 HRGMv2_0871_16_24 29603 30565 + FHA
STP HRGMv2_0871_16 HRGMv2_0871_16_25 30737 32821 + Pkinase
TC HRGMv2_0871_16 HRGMv2_0871_16_26 33153 35492 + 3.A.3.5.15
Gene ID: HRGMv2_0871_16_14
Type: TC
Location: 14231 - 15607 (-)
Gene ID: HRGMv2_0871_16_15
Type:
Location: 15611 - 16666 (-)
Gene ID: HRGMv2_0871_16_16
Type: TC
Location: 16669 - 18480 (-)
Gene ID: HRGMv2_0871_16_17
Type: STP
Location: 18474 - 20306 (-)
Gene ID: HRGMv2_0871_16_18
Type: CAZyme
Location: 20562 - 21944 (-)
Gene ID: HRGMv2_0871_16_19
Type: TC
Location: 21948 - 23564 (-)
Gene ID: HRGMv2_0871_16_20
Type: pfam
Location: 23664 - 24530 (-)
Gene ID: HRGMv2_0871_16_21
Type: TC
Location: 24537 - 25049 (-)
Gene ID: HRGMv2_0871_16_22
Type: STP
Location: 25393 - 26154 (-)
Gene ID: HRGMv2_0871_16_23
Type: TC
Location: 26773 - 29022 (-)
Gene ID: HRGMv2_0871_16_24
Type: STP
Location: 29603 - 30565 (+)
Gene ID: HRGMv2_0871_16_25
Type: STP
Location: 30737 - 32821 (+)
Gene ID: HRGMv2_0871_16_26
Type: TC
Location: 33153 - 35492 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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