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Cluster: HRGMv2_0871_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0871_14 HRGMv2_0871_14_25 37257 38006 + 9.B.18.1.2
CAZyme HRGMv2_0871_14 HRGMv2_0871_14_26 37993 38799 + GT26
pfam HRGMv2_0871_14 HRGMv2_0871_14_27 38792 39901 + Epimerase_2
CAZyme HRGMv2_0871_14 HRGMv2_0871_14_28 39898 41007 + GT4
pfam HRGMv2_0871_14 HRGMv2_0871_14_29 41009 41884 + LicD
NULL(UNKNOWN) HRGMv2_0871_14 HRGMv2_0871_14_30 41868 42344 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0871_14 HRGMv2_0871_14_31 42372 43409 + GT2
NULL(UNKNOWN) HRGMv2_0871_14 HRGMv2_0871_14_32 43425 44063 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0871_14 HRGMv2_0871_14_33 44079 44789 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0871_14 HRGMv2_0871_14_34 44792 45793 + GT2
Gene ID: HRGMv2_0871_14_25
Type: TC
Location: 37257 - 38006 (+)
Gene ID: HRGMv2_0871_14_26
Type: CAZyme
Location: 37993 - 38799 (+)
Gene ID: HRGMv2_0871_14_27
Type: pfam
Location: 38792 - 39901 (+)
Gene ID: HRGMv2_0871_14_28
Type: CAZyme
Location: 39898 - 41007 (+)
Gene ID: HRGMv2_0871_14_29
Type: pfam
Location: 41009 - 41884 (+)
Gene ID: HRGMv2_0871_14_30
Type:
Location: 41868 - 42344 (+)
Gene ID: HRGMv2_0871_14_31
Type: CAZyme
Location: 42372 - 43409 (+)
Gene ID: HRGMv2_0871_14_32
Type:
Location: 43425 - 44063 (+)
Gene ID: HRGMv2_0871_14_33
Type:
Location: 44079 - 44789 (+)
Gene ID: HRGMv2_0871_14_34
Type: CAZyme
Location: 44792 - 45793 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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