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Cluster: HRGMv2_0871_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0871_13 HRGMv2_0871_13_28 36145 37821 + 3.A.1.5.35
TC HRGMv2_0871_13 HRGMv2_0871_13_29 37978 39015 + 3.A.1.5.37
TC HRGMv2_0871_13 HRGMv2_0871_13_30 39030 39965 + 3.A.1.5.11
TC HRGMv2_0871_13 HRGMv2_0871_13_31 39968 41059 + 3.A.1.5.34
TC HRGMv2_0871_13 HRGMv2_0871_13_32 41060 42088 + 3.A.1.5.36
STP HRGMv2_0871_13 HRGMv2_0871_13_33 42828 45173 + GAF | SpoIIE
STP HRGMv2_0871_13 HRGMv2_0871_13_34 45255 46001 + STAS
CAZyme HRGMv2_0871_13 HRGMv2_0871_13_35 46746 48479 + GH13_30
Gene ID: HRGMv2_0871_13_28
Type: TC
Location: 36145 - 37821 (+)
Gene ID: HRGMv2_0871_13_29
Type: TC
Location: 37978 - 39015 (+)
Gene ID: HRGMv2_0871_13_30
Type: TC
Location: 39030 - 39965 (+)
Gene ID: HRGMv2_0871_13_31
Type: TC
Location: 39968 - 41059 (+)
Gene ID: HRGMv2_0871_13_32
Type: TC
Location: 41060 - 42088 (+)
Gene ID: HRGMv2_0871_13_33
Type: STP
Location: 42828 - 45173 (+)
Gene ID: HRGMv2_0871_13_34
Type: STP
Location: 45255 - 46001 (+)
Gene ID: HRGMv2_0871_13_35
Type: CAZyme
Location: 46746 - 48479 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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