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Cluster: HRGMv2_0871_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0871_13 HRGMv2_0871_13_10 13635 15938 + 2.A.66.4.4
pfam HRGMv2_0871_13 HRGMv2_0871_13_11 15945 17885 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0871_13 HRGMv2_0871_13_12 18251 19864 + 3.A.1.5.27
TC HRGMv2_0871_13 HRGMv2_0871_13_13 20022 20978 + 3.A.1.5.38
TC HRGMv2_0871_13 HRGMv2_0871_13_14 20982 22997 + 3.A.1.5.25
TC HRGMv2_0871_13 HRGMv2_0871_13_15 22998 23825 + 3.A.1.5.27
CAZyme HRGMv2_0871_13 HRGMv2_0871_13_16 23957 24883 + CE7
Gene ID: HRGMv2_0871_13_10
Type: TC
Location: 13635 - 15938 (+)
Gene ID: HRGMv2_0871_13_11
Type: pfam
Location: 15945 - 17885 (+)
Gene ID: HRGMv2_0871_13_12
Type: TC
Location: 18251 - 19864 (+)
Gene ID: HRGMv2_0871_13_13
Type: TC
Location: 20022 - 20978 (+)
Gene ID: HRGMv2_0871_13_14
Type: TC
Location: 20982 - 22997 (+)
Gene ID: HRGMv2_0871_13_15
Type: TC
Location: 22998 - 23825 (+)
Gene ID: HRGMv2_0871_13_16
Type: CAZyme
Location: 23957 - 24883 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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