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Cluster: HRGMv2_0870_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0870_35 HRGMv2_0870_35_4 2377 2715 - 4.A.3.1.2
TF HRGMv2_0870_35 HRGMv2_0870_35_5 2930 3934 - LacI
TC HRGMv2_0870_35 HRGMv2_0870_35_6 4292 6058 + 4.A.3.1.1
CAZyme HRGMv2_0870_35 HRGMv2_0870_35_7 6125 7564 + GH1
TF HRGMv2_0870_35 HRGMv2_0870_35_8 7841 8878 - LacI
CAZyme HRGMv2_0870_35 HRGMv2_0870_35_9 9220 10662 + GH1
TC HRGMv2_0870_35 HRGMv2_0870_35_10 10839 12599 + 4.A.3.1.1
TF HRGMv2_0870_35 HRGMv2_0870_35_11 12853 13863 - LacI
TC HRGMv2_0870_35 HRGMv2_0870_35_12 14139 15416 + 4.A.3.1.1
Gene ID: HRGMv2_0870_35_4
Type: TC
Location: 2377 - 2715 (-)
Gene ID: HRGMv2_0870_35_5
Type: TF
Location: 2930 - 3934 (-)
Gene ID: HRGMv2_0870_35_6
Type: TC
Location: 4292 - 6058 (+)
Gene ID: HRGMv2_0870_35_7
Type: CAZyme
Location: 6125 - 7564 (+)
Gene ID: HRGMv2_0870_35_8
Type: TF
Location: 7841 - 8878 (-)
Gene ID: HRGMv2_0870_35_9
Type: CAZyme
Location: 9220 - 10662 (+)
Gene ID: HRGMv2_0870_35_10
Type: TC
Location: 10839 - 12599 (+)
Gene ID: HRGMv2_0870_35_11
Type: TF
Location: 12853 - 13863 (-)
Gene ID: HRGMv2_0870_35_12
Type: TC
Location: 14139 - 15416 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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