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Cluster: HRGMv2_0868_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0868_5 HRGMv2_0868_5_4 3719 5185 - 2.A.66.2.23
pfam HRGMv2_0868_5 HRGMv2_0868_5_5 5270 6217 - ATPgrasp_TupA
pfam HRGMv2_0868_5 HRGMv2_0868_5_6 6361 7449 - EpsG
CAZyme HRGMv2_0868_5 HRGMv2_0868_5_7 7446 8549 - GT4
pfam HRGMv2_0868_5 HRGMv2_0868_5_8 8546 9493 - C5-epim_C
CAZyme HRGMv2_0868_5 HRGMv2_0868_5_9 9493 10785 - GT4
pfam HRGMv2_0868_5 HRGMv2_0868_5_10 10791 12062 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_0868_5 HRGMv2_0868_5_11 12106 13023 - GT2
TC HRGMv2_0868_5 HRGMv2_0868_5_12 13027 13791 - 9.B.18.1.2
Gene ID: HRGMv2_0868_5_4
Type: TC
Location: 3719 - 5185 (-)
Gene ID: HRGMv2_0868_5_5
Type: pfam
Location: 5270 - 6217 (-)
Gene ID: HRGMv2_0868_5_6
Type: pfam
Location: 6361 - 7449 (-)
Gene ID: HRGMv2_0868_5_7
Type: CAZyme
Location: 7446 - 8549 (-)
Gene ID: HRGMv2_0868_5_8
Type: pfam
Location: 8546 - 9493 (-)
Gene ID: HRGMv2_0868_5_9
Type: CAZyme
Location: 9493 - 10785 (-)
Gene ID: HRGMv2_0868_5_10
Type: pfam
Location: 10791 - 12062 (-)
Gene ID: HRGMv2_0868_5_11
Type: CAZyme
Location: 12106 - 13023 (-)
Gene ID: HRGMv2_0868_5_12
Type: TC
Location: 13027 - 13791 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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