dbCAN Logo

Cluster: HRGMv2_0868_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0868_25 HRGMv2_0868_25_10 9523 11028 + GH77
CAZyme HRGMv2_0868_25 HRGMv2_0868_25_11 11156 13423 + GT35
TC HRGMv2_0868_25 HRGMv2_0868_25_12 13880 15079 - 3.A.1.1.22
TC HRGMv2_0868_25 HRGMv2_0868_25_13 15148 15987 - 3.A.1.1.45
TC HRGMv2_0868_25 HRGMv2_0868_25_14 15987 16841 - 3.A.1.1.45
TC HRGMv2_0868_25 HRGMv2_0868_25_15 16929 18245 - 3.A.1.1.45
TF HRGMv2_0868_25 HRGMv2_0868_25_16 18552 19271 - GntR
NULL(UNKNOWN) HRGMv2_0868_25 HRGMv2_0868_25_17 19355 19474 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0868_25 HRGMv2_0868_25_18 19496 21946 + 4.A.1.1.8
Gene ID: HRGMv2_0868_25_10
Type: CAZyme
Location: 9523 - 11028 (+)
Gene ID: HRGMv2_0868_25_11
Type: CAZyme
Location: 11156 - 13423 (+)
Gene ID: HRGMv2_0868_25_12
Type: TC
Location: 13880 - 15079 (-)
Gene ID: HRGMv2_0868_25_13
Type: TC
Location: 15148 - 15987 (-)
Gene ID: HRGMv2_0868_25_14
Type: TC
Location: 15987 - 16841 (-)
Gene ID: HRGMv2_0868_25_15
Type: TC
Location: 16929 - 18245 (-)
Gene ID: HRGMv2_0868_25_16
Type: TF
Location: 18552 - 19271 (-)
Gene ID: HRGMv2_0868_25_17
Type:
Location: 19355 - 19474 (-)
Gene ID: HRGMv2_0868_25_18
Type: TC
Location: 19496 - 21946 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List