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Cluster: HRGMv2_0868_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0868_19 HRGMv2_0868_19_19 21737 22621 - CE7
TC HRGMv2_0868_19 HRGMv2_0868_19_20 22795 23622 - 3.A.1.5.27
TC HRGMv2_0868_19 HRGMv2_0868_19_21 23623 25638 - 3.A.1.5.25
TC HRGMv2_0868_19 HRGMv2_0868_19_22 25642 26598 - 3.A.1.5.38
TC HRGMv2_0868_19 HRGMv2_0868_19_23 26756 28369 - 3.A.1.5.27
pfam HRGMv2_0868_19 HRGMv2_0868_19_24 28734 30674 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0868_19 HRGMv2_0868_19_25 30681 32363 - 2.A.66.4.4
Gene ID: HRGMv2_0868_19_19
Type: CAZyme
Location: 21737 - 22621 (-)
Gene ID: HRGMv2_0868_19_20
Type: TC
Location: 22795 - 23622 (-)
Gene ID: HRGMv2_0868_19_21
Type: TC
Location: 23623 - 25638 (-)
Gene ID: HRGMv2_0868_19_22
Type: TC
Location: 25642 - 26598 (-)
Gene ID: HRGMv2_0868_19_23
Type: TC
Location: 26756 - 28369 (-)
Gene ID: HRGMv2_0868_19_24
Type: pfam
Location: 28734 - 30674 (-)
Gene ID: HRGMv2_0868_19_25
Type: TC
Location: 30681 - 32363 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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