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Cluster: HRGMv2_0868_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0868_15 HRGMv2_0868_15_11 15668 17044 - GH13_20
TC HRGMv2_0868_15 HRGMv2_0868_15_12 17199 18395 - 2.A.1.2.18
TC HRGMv2_0868_15 HRGMv2_0868_15_13 18520 20880 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_0868_15 HRGMv2_0868_15_14 21002 21322 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0868_15 HRGMv2_0868_15_15 21370 22269 - S09.UPW
TC HRGMv2_0868_15 HRGMv2_0868_15_16 22517 23080 + 4.A.1.2.6
pfam HRGMv2_0868_15 HRGMv2_0868_15_17 23262 24665 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0868_15 HRGMv2_0868_15_18 24924 25709 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0868_15 HRGMv2_0868_15_19 25870 26850 + 3.A.1.34.1
TC HRGMv2_0868_15 HRGMv2_0868_15_20 27055 27978 + 3.A.1.34.1
TC HRGMv2_0868_15 HRGMv2_0868_15_21 27971 28765 + 3.A.1.34.1
TC HRGMv2_0868_15 HRGMv2_0868_15_22 28958 29725 + 1.A.23.4.2
pfam HRGMv2_0868_15 HRGMv2_0868_15_23 29820 31736 + Bmp
pfam HRGMv2_0868_15 HRGMv2_0868_15_24 31733 32443 + Metallophos | Metallophos_2
TC HRGMv2_0868_15 HRGMv2_0868_15_25 32569 33276 - 1.C.82.1.1
Gene ID: HRGMv2_0868_15_11
Type: CAZyme
Location: 15668 - 17044 (-)
Gene ID: HRGMv2_0868_15_12
Type: TC
Location: 17199 - 18395 (-)
Gene ID: HRGMv2_0868_15_13
Type: TC
Location: 18520 - 20880 (-)
Gene ID: HRGMv2_0868_15_14
Type:
Location: 21002 - 21322 (-)
Gene ID: HRGMv2_0868_15_15
Type: peptidase
Location: 21370 - 22269 (-)
Gene ID: HRGMv2_0868_15_16
Type: TC
Location: 22517 - 23080 (+)
Gene ID: HRGMv2_0868_15_17
Type: pfam
Location: 23262 - 24665 (+)
Gene ID: HRGMv2_0868_15_18
Type:
Location: 24924 - 25709 (+)
Gene ID: HRGMv2_0868_15_19
Type: TC
Location: 25870 - 26850 (+)
Gene ID: HRGMv2_0868_15_20
Type: TC
Location: 27055 - 27978 (+)
Gene ID: HRGMv2_0868_15_21
Type: TC
Location: 27971 - 28765 (+)
Gene ID: HRGMv2_0868_15_22
Type: TC
Location: 28958 - 29725 (+)
Gene ID: HRGMv2_0868_15_23
Type: pfam
Location: 29820 - 31736 (+)
Gene ID: HRGMv2_0868_15_24
Type: pfam
Location: 31733 - 32443 (+)
Gene ID: HRGMv2_0868_15_25
Type: TC
Location: 32569 - 33276 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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