dbCAN Logo

Cluster: HRGMv2_0868_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0868_1 HRGMv2_0868_1_7 7870 9252 - GH4
TC HRGMv2_0868_1 HRGMv2_0868_1_8 9256 10872 - 4.A.1.1.3
pfam HRGMv2_0868_1 HRGMv2_0868_1_9 10972 11838 - PRD | PRD | CAT_RBD
TC HRGMv2_0868_1 HRGMv2_0868_1_10 11845 12357 - 4.A.1.2.5
TC HRGMv2_0868_1 HRGMv2_0868_1_11 12723 14987 - 1.I.1.1.3
STP HRGMv2_0868_1 HRGMv2_0868_1_12 15587 16549 + FHA
STP HRGMv2_0868_1 HRGMv2_0868_1_13 16721 18805 + Pkinase
TC HRGMv2_0868_1 HRGMv2_0868_1_14 19136 21475 + 3.A.3.5.15
Gene ID: HRGMv2_0868_1_7
Type: CAZyme
Location: 7870 - 9252 (-)
Gene ID: HRGMv2_0868_1_8
Type: TC
Location: 9256 - 10872 (-)
Gene ID: HRGMv2_0868_1_9
Type: pfam
Location: 10972 - 11838 (-)
Gene ID: HRGMv2_0868_1_10
Type: TC
Location: 11845 - 12357 (-)
Gene ID: HRGMv2_0868_1_11
Type: TC
Location: 12723 - 14987 (-)
Gene ID: HRGMv2_0868_1_12
Type: STP
Location: 15587 - 16549 (+)
Gene ID: HRGMv2_0868_1_13
Type: STP
Location: 16721 - 18805 (+)
Gene ID: HRGMv2_0868_1_14
Type: TC
Location: 19136 - 21475 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List