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Cluster: HRGMv2_0866_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0866_28 HRGMv2_0866_28_9 8813 10318 + GH77
CAZyme HRGMv2_0866_28 HRGMv2_0866_28_10 10447 12714 + GT35
TC HRGMv2_0866_28 HRGMv2_0866_28_11 13091 14290 - 3.A.1.1.22
TC HRGMv2_0866_28 HRGMv2_0866_28_12 14359 15198 - 3.A.1.1.45
TC HRGMv2_0866_28 HRGMv2_0866_28_13 15198 16052 - 3.A.1.1.45
TC HRGMv2_0866_28 HRGMv2_0866_28_14 16140 17456 - 3.A.1.1.45
TF HRGMv2_0866_28 HRGMv2_0866_28_15 17763 18482 - GntR
TC HRGMv2_0866_28 HRGMv2_0866_28_16 18710 21160 + 4.A.1.1.8
Gene ID: HRGMv2_0866_28_9
Type: CAZyme
Location: 8813 - 10318 (+)
Gene ID: HRGMv2_0866_28_10
Type: CAZyme
Location: 10447 - 12714 (+)
Gene ID: HRGMv2_0866_28_11
Type: TC
Location: 13091 - 14290 (-)
Gene ID: HRGMv2_0866_28_12
Type: TC
Location: 14359 - 15198 (-)
Gene ID: HRGMv2_0866_28_13
Type: TC
Location: 15198 - 16052 (-)
Gene ID: HRGMv2_0866_28_14
Type: TC
Location: 16140 - 17456 (-)
Gene ID: HRGMv2_0866_28_15
Type: TF
Location: 17763 - 18482 (-)
Gene ID: HRGMv2_0866_28_16
Type: TC
Location: 18710 - 21160 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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