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Cluster: HRGMv2_0866_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0866_20 HRGMv2_0866_20_17 17403 18329 - CE7
TC HRGMv2_0866_20 HRGMv2_0866_20_18 18461 19288 - 3.A.1.5.27
TC HRGMv2_0866_20 HRGMv2_0866_20_19 19289 21304 - 3.A.1.5.25
TC HRGMv2_0866_20 HRGMv2_0866_20_20 21308 22264 - 3.A.1.5.38
TC HRGMv2_0866_20 HRGMv2_0866_20_21 22420 24033 - 3.A.1.5.27
pfam HRGMv2_0866_20 HRGMv2_0866_20_22 24399 26339 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0866_20 HRGMv2_0866_20_23 26346 28028 - 2.A.66.4.4
Gene ID: HRGMv2_0866_20_17
Type: CAZyme
Location: 17403 - 18329 (-)
Gene ID: HRGMv2_0866_20_18
Type: TC
Location: 18461 - 19288 (-)
Gene ID: HRGMv2_0866_20_19
Type: TC
Location: 19289 - 21304 (-)
Gene ID: HRGMv2_0866_20_20
Type: TC
Location: 21308 - 22264 (-)
Gene ID: HRGMv2_0866_20_21
Type: TC
Location: 22420 - 24033 (-)
Gene ID: HRGMv2_0866_20_22
Type: pfam
Location: 24399 - 26339 (-)
Gene ID: HRGMv2_0866_20_23
Type: TC
Location: 26346 - 28028 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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