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Cluster: HRGMv2_0864_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0864_4 HRGMv2_0864_4_112 118013 119518 + GH77
CAZyme HRGMv2_0864_4 HRGMv2_0864_4_113 119646 121913 + GT35
TC HRGMv2_0864_4 HRGMv2_0864_4_114 122448 123647 - 3.A.1.1.22
TC HRGMv2_0864_4 HRGMv2_0864_4_115 123716 124555 - 3.A.1.1.45
TC HRGMv2_0864_4 HRGMv2_0864_4_116 124555 125409 - 3.A.1.1.45
TC HRGMv2_0864_4 HRGMv2_0864_4_117 125497 126813 - 3.A.1.1.45
TF HRGMv2_0864_4 HRGMv2_0864_4_118 127120 127839 - GntR
TC HRGMv2_0864_4 HRGMv2_0864_4_119 128067 130520 + 4.A.1.1.8
Gene ID: HRGMv2_0864_4_112
Type: CAZyme
Location: 118013 - 119518 (+)
Gene ID: HRGMv2_0864_4_113
Type: CAZyme
Location: 119646 - 121913 (+)
Gene ID: HRGMv2_0864_4_114
Type: TC
Location: 122448 - 123647 (-)
Gene ID: HRGMv2_0864_4_115
Type: TC
Location: 123716 - 124555 (-)
Gene ID: HRGMv2_0864_4_116
Type: TC
Location: 124555 - 125409 (-)
Gene ID: HRGMv2_0864_4_117
Type: TC
Location: 125497 - 126813 (-)
Gene ID: HRGMv2_0864_4_118
Type: TF
Location: 127120 - 127839 (-)
Gene ID: HRGMv2_0864_4_119
Type: TC
Location: 128067 - 130520 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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