dbCAN Logo

Cluster: HRGMv2_0864_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0864_4 HRGMv2_0864_4_1 116 454 - 4.A.3.1.2
TF HRGMv2_0864_4 HRGMv2_0864_4_2 669 1703 - LacI
TC HRGMv2_0864_4 HRGMv2_0864_4_3 2030 3805 + 4.A.3.1.1
CAZyme HRGMv2_0864_4 HRGMv2_0864_4_4 3872 5311 + GH1
TF HRGMv2_0864_4 HRGMv2_0864_4_5 5586 6596 - LacI
TC HRGMv2_0864_4 HRGMv2_0864_4_6 6872 8650 + 4.A.3.1.1
CAZyme HRGMv2_0864_4 HRGMv2_0864_4_7 8726 10147 + GH1
TF HRGMv2_0864_4 HRGMv2_0864_4_8 10344 11108 - HTH_DeoR
sulfatase HRGMv2_0864_4 HRGMv2_0864_4_9 11315 12367 + S1_4
TC HRGMv2_0864_4 HRGMv2_0864_4_10 12694 13176 - 4.A.6.1.5
Gene ID: HRGMv2_0864_4_1
Type: TC
Location: 116 - 454 (-)
Gene ID: HRGMv2_0864_4_2
Type: TF
Location: 669 - 1703 (-)
Gene ID: HRGMv2_0864_4_3
Type: TC
Location: 2030 - 3805 (+)
Gene ID: HRGMv2_0864_4_4
Type: CAZyme
Location: 3872 - 5311 (+)
Gene ID: HRGMv2_0864_4_5
Type: TF
Location: 5586 - 6596 (-)
Gene ID: HRGMv2_0864_4_6
Type: TC
Location: 6872 - 8650 (+)
Gene ID: HRGMv2_0864_4_7
Type: CAZyme
Location: 8726 - 10147 (+)
Gene ID: HRGMv2_0864_4_8
Type: TF
Location: 10344 - 11108 (-)
Gene ID: HRGMv2_0864_4_9
Type: sulfatase
Location: 11315 - 12367 (+)
Gene ID: HRGMv2_0864_4_10
Type: TC
Location: 12694 - 13176 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List