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Cluster: HRGMv2_0863_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0863_1 HRGMv2_0863_1_297 343223 344017 - 3.A.1.34.1
TC HRGMv2_0863_1 HRGMv2_0863_1_298 344010 344933 - 3.A.1.34.1
TC HRGMv2_0863_1 HRGMv2_0863_1_299 345138 346118 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0863_1 HRGMv2_0863_1_300 346279 347064 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0863_1 HRGMv2_0863_1_301 347314 348717 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0863_1 HRGMv2_0863_1_302 348899 349462 - 4.A.1.2.6
peptidase HRGMv2_0863_1 HRGMv2_0863_1_303 349709 350608 + S09.UPW
NULL(UNKNOWN) HRGMv2_0863_1 HRGMv2_0863_1_304 350656 350976 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0863_1 HRGMv2_0863_1_305 351098 353458 + 9.A.8.1.6
TC HRGMv2_0863_1 HRGMv2_0863_1_306 353580 354776 + 2.A.1.2.18
CAZyme HRGMv2_0863_1 HRGMv2_0863_1_307 354929 356305 + GH13_20
Gene ID: HRGMv2_0863_1_297
Type: TC
Location: 343223 - 344017 (-)
Gene ID: HRGMv2_0863_1_298
Type: TC
Location: 344010 - 344933 (-)
Gene ID: HRGMv2_0863_1_299
Type: TC
Location: 345138 - 346118 (-)
Gene ID: HRGMv2_0863_1_300
Type:
Location: 346279 - 347064 (-)
Gene ID: HRGMv2_0863_1_301
Type: pfam
Location: 347314 - 348717 (-)
Gene ID: HRGMv2_0863_1_302
Type: TC
Location: 348899 - 349462 (-)
Gene ID: HRGMv2_0863_1_303
Type: peptidase
Location: 349709 - 350608 (+)
Gene ID: HRGMv2_0863_1_304
Type:
Location: 350656 - 350976 (+)
Gene ID: HRGMv2_0863_1_305
Type: TC
Location: 351098 - 353458 (+)
Gene ID: HRGMv2_0863_1_306
Type: TC
Location: 353580 - 354776 (+)
Gene ID: HRGMv2_0863_1_307
Type: CAZyme
Location: 354929 - 356305 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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