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Cluster: HRGMv2_0863_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0863_1 HRGMv2_0863_1_146 163033 164454 - GH1
TC HRGMv2_0863_1 HRGMv2_0863_1_147 164530 166314 - 4.A.3.1.1
TF HRGMv2_0863_1 HRGMv2_0863_1_148 166599 167600 + LacI
CAZyme HRGMv2_0863_1 HRGMv2_0863_1_149 167961 169400 - GH1
TC HRGMv2_0863_1 HRGMv2_0863_1_150 169467 171242 - 4.A.3.1.1
TF HRGMv2_0863_1 HRGMv2_0863_1_151 171598 172602 + LacI
TC HRGMv2_0863_1 HRGMv2_0863_1_152 172817 173155 + 4.A.3.1.2
Gene ID: HRGMv2_0863_1_146
Type: CAZyme
Location: 163033 - 164454 (-)
Gene ID: HRGMv2_0863_1_147
Type: TC
Location: 164530 - 166314 (-)
Gene ID: HRGMv2_0863_1_148
Type: TF
Location: 166599 - 167600 (+)
Gene ID: HRGMv2_0863_1_149
Type: CAZyme
Location: 167961 - 169400 (-)
Gene ID: HRGMv2_0863_1_150
Type: TC
Location: 169467 - 171242 (-)
Gene ID: HRGMv2_0863_1_151
Type: TF
Location: 171598 - 172602 (+)
Gene ID: HRGMv2_0863_1_152
Type: TC
Location: 172817 - 173155 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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